Welcome to EpiCompBio’s documentation¶

Contents:

  • Welcome
  • Notes on reproducibility in biomedical research
  • Notes on computational pipelines for biomedial research
  • Packaging in Python
  • Notes on how to create technical documents
  • restructuredText tutorials/info
  • Generate python package documentation with Sphinx and render rst docs
  • Substitutions in restructuredText files
  • Notes on continuous integration
  • References and reviews of computational pipelines
  • Notes on using Docopt for script command line options
  • Docker workflow notes and Dockerfile example
  • To do
  • Best practice checklists

Indices and tables¶

  • Index
  • Module Index
  • Search Page

EpiCompBio welcome notes

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Contents:

  • Welcome
  • Notes on reproducibility in biomedical research
  • Notes on computational pipelines for biomedial research
  • Packaging in Python
  • Notes on how to create technical documents
  • restructuredText tutorials/info
  • Generate python package documentation with Sphinx and render rst docs
  • Substitutions in restructuredText files
  • Notes on continuous integration
  • References and reviews of computational pipelines
  • Notes on using Docopt for script command line options
  • Docker workflow notes and Dockerfile example
  • To do
  • Best practice checklists

Related Topics

  • Documentation overview
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